In this tutorial, we perform an advanced single-cell RNA-seq analysis workflow using Scanpy on the PBMC-3k benchmark dataset. We start by loading the dataset, inspecting its structure, and applying ...

If you are using (Ana-)conda (or mamba), you can also obtain Netgraph from conda-forge: Please raise an issue. Include any relevant code and data in a minimal, reproducible example. If applicable, ...

Neuroinflammation after stroke is characterized by the activation of resident microglia and the invasion of circulating leukocytes into the brain. Although lymphocytes infiltrate the brain in small ...

NDlib provides implementations of several spreading and opinion dynamics models. The project documentation can be found on ReadTheDocs. If you use NDlib as support to your research consider citing: G.

Neuroanatomy has become a large-scale, digital and quantitative discipline. Improvements in sample preparation and imaging increasingly enable the collection of large 3D image volumes containing ...

SCANPY is a scalable toolkit for analyzing single-cell gene expression data. It includes methods for preprocessing, visualization, clustering, pseudotime and trajectory inference, differential ...